ECD_02467

ID ECD_02467 Type CDS
From 2576612 nt length 576
To 2576037 aa length 191
Gene rpoE pI 5.13
Definition RNA polymerase sigma E factor M.W (Da) 21695
Note AseI frg.
SignalP v.3 | plot Category

Orthologs (if any)

Bacteria*

Reciprocally best hit to

Score

E-value

Pfam search result

	Model	No.	Description	Position (aa)	Score	E-value
	Sigma70_r4_2	1	Sigma-70, region 4	129-180	69.2	1.8e-19
	Sigma70_r2	1	Sigma-70 region 2	25-91	65.7	2.3e-18
	Sigma70_r4	1	Sigma-70, region 4	135-180	41.6	6.4e-11
	Sigma70_ECF	1	ECF sigma factor	10-183	35.1	1.2e-08

BLAST search result (top 10 hits)

ID	Description	Score	E-value
P0AGB8.1	RecName: Full=ECF RNA polymerase sigma-E factor; AltName: Full=RNA ...	999	1.8e-139
P0A2F0.1	RecName: Full=ECF RNA polymerase sigma-E factor; AltName: Full=RNA ...	997	4.5e-139
P44790.1	RecName: Full=ECF RNA polymerase sigma-E factor; AltName: Full=RNA ...	757	1.6e-102
Q06198.1	RecName: Full=RNA polymerase sigma-H factor; AltName: Full=Sigma-30	668	5.2e-89
Q45585.1	RecName: Full=ECF RNA polymerase sigma factor SigW; Short=ECF sigma...	260	2.3e-27
P66808.1	RecName: Full=ECF RNA polymerase sigma factor SigH; Short=ECF sigma...	210	1.2e-19
Q7AKG9.1	RecName: Full=ECF RNA polymerase sigma factor SigR; Short=ECF sigma...	208	2.6e-19
A0QTP2.2	RecName: Full=ECF RNA polymerase sigma factor SigH; Short=ECF sigma...	207	3.7e-19
P37978.1	RecName: Full=RNA polymerase sigma factor CnrH	195	1.1e-17
Q44583.1	RecName: Full=RNA polymerase sigma factor NccH	193	2.5e-17

PSORT result

Localization	Certainty	PSORT said
Not Clear