ECD_02470

ID ECD_02470 Type CDS
From 2579496 nt length 1335
To 2580830 aa length 444
Gene srmB pI 9.82
Definition ATP-dependent RNA helicase M.W (Da) 49898
Note AseI frg.
SignalP v.3 | plot Category

Orthologs (if any)

Bacteria*

Reciprocally best hit to

Score

E-value

Pfam search result

	Model	No.	Description	Position (aa)	Score	E-value
	DEAD	1	DEAD/DEAH box helicase	28-197	160.4	3.6e-47
	Helicase_C	1	Helicase conserved C-terminal domain	236-343	106.7	8e-31
	ResIII	1	Type III restriction enzyme, res subunit	47-192	36.8	3.8e-09

BLAST search result (top 10 hits)

ID	Description	Score	E-value
P21507.1	RecName: Full=ATP-dependent RNA helicase SrmB	2070	0.0e+00
P44701.1	RecName: Full=ATP-dependent RNA helicase SrmB	1410	0.0e+00
P33906.3	RecName: Full=ATP-dependent RNA helicase DeaD; AltName: Full=Cold-s...	640	1.7e-75
P0A9P7.2	RecName: Full=ATP-dependent RNA helicase DeaD; AltName: Full=Cold-s...	637	3.6e-75
Q8XA87.3	RecName: Full=ATP-dependent RNA helicase DeaD; AltName: Full=Cold-s...	636	4.2e-75
O25029.1	RecName: Full=DEAD-box ATP-dependent RNA helicase RhpA	623	1.6e-74
B9XXL6.1	RecName: Full=DEAD-box ATP-dependent RNA helicase RhpA	621	3.4e-74
Q0HN76.1	RecName: Full=ATP-dependent RNA helicase RhlB >sp	615	6.8e-74
P25888.3	RecName: Full=ATP-dependent RNA helicase RhlE	609	8.3e-73
A3D9I5.1	RecName: Full=ATP-dependent RNA helicase RhlB >sp	604	2.4e-72

PSORT result

Localization	Certainty	PSORT said
Not Clear