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IDCP970_11095 TypeCDS
From2772633 nt length1254
To2773886 aa length417
Gene pI9.11
Definitionhelix-turn-helix domain-containing protein M.W (Da)44258
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2428 putative citrate synthase-like protein6210.0e+00
coelSCO5831 putative citrate synthase-like protein5560.0e+00
sgrSGR_1692 putative citrate synthase-like protein4993.0e-177

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Citrate_synt1Citrate synthase, C-terminal domain77-400229.37.2e-68

HTH_171Helix-turn-helix domain13-6434.41.9e-08

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_098245202.1 helix-turn-helix domain-containing protein [Streptomyces for... 15990.0e+00
ATL30983.1 Citrate synthase (si) [Streptomyces formicae] 15990.0e+00
WP_069884968.1 helix-turn-helix domain-containing protein [Streptomyces lut... 15940.0e+00
WP_055697103.1 helix-turn-helix domain-containing protein [Streptomyces sil... 15940.0e+00
WP_055566755.1 helix-turn-helix domain-containing protein [Streptomyces atr... 14860.0e+00
WP_055531398.1 helix-turn-helix domain-containing protein [Streptomyces alb... 14800.0e+00
WP_150186624.1 helix-turn-helix domain-containing protein [Streptomyces ven... 14600.0e+00
WP_106976961.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 14600.0e+00
WP_125515525.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 14580.0e+00
WP_160507636.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 14400.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear