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IDCP970_11140 TypeCDS
From2784391 nt length2124
To2782268 aa length707
Gene pI8.02
Definitiontype IIA DNA topoisomerase subunit B M.W (Da)77249
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2442 putative subunit of topoisomerase IV12980.0e+00
coelSCO5822 putative DNA gyrase subunit B 12730.0e+00
sgrSGR_1698 putative DNA gyrase subunit B12590.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

DNA_gyraseB1DNA gyrase B260-452189.14.5e-56

DNA_gyraseB_C1DNA gyrase B subunit, carboxyl terminus636-69384.73.7e-24

HATPase_c1Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase48-15372.05.5e-20

Toprim1Toprim domain481-58859.43.4e-16

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_098245193.1 type IIA DNA topoisomerase subunit B [Streptomyces formicae]... 35990.0e+00
WP_030357360.1 MULTISPECIES: type IIA DNA topoisomerase subunit B [Streptom... 34370.0e+00
WP_150215774.1 DNA gyrase subunit B [Streptomyces venezuelae] >gb 34240.0e+00
WP_055569540.1 type IIA DNA topoisomerase subunit B [Streptomyces atriruber... 34180.0e+00
WP_062780114.1 MULTISPECIES: type IIA DNA topoisomerase subunit B [unclassi... 34180.0e+00
WP_127911236.1 type IIA DNA topoisomerase subunit B [Streptomyces huasconen... 34170.0e+00
WP_135330771.1 type IIA DNA topoisomerase subunit B [Streptomyces sp. MZ04]... 34140.0e+00
WP_164319670.1 DNA gyrase subunit B [Streptomyces aureoverticillatus] >gb 34140.0e+00
WP_150186616.1 DNA gyrase subunit B [Streptomyces venezuelae] >gb 34130.0e+00
WP_160507630.1 DNA gyrase subunit B [Streptomyces sp. BA2] >gb 34120.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear