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IDCP970_11575 TypeCDS
From2883656 nt length372
To2883285 aa length123
Gene pI6.39
DefinitionXRE family transcriptional regulator M.W (Da)13294
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2505 putative DNA-binding protein1922.0e-65
coelSCO5755 hypothetical protein1913.0e-65
sgrSGR_1766 conserved hypothetical protein1542.0e-50

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_311Helix-turn-helix domain8-6540.92e-10

HTH_31Helix-turn-helix12-6638.11.2e-09

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_062782970.1 MULTISPECIES: helix-turn-helix transcriptional regulator [St... 3282.0e-37
WP_073789309.1 MULTISPECIES: helix-turn-helix transcriptional regulator [St... 3221.2e-36
WP_121786583.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 3212.3e-36
WP_005481441.1 MULTISPECIES: helix-turn-helix transcriptional regulator [St... 3194.6e-36
WP_055529762.1 MULTISPECIES: helix-turn-helix transcriptional regulator [St... 3194.6e-36
WP_086752029.1 helix-turn-helix transcriptional regulator [Streptomyces sca... 3194.9e-36
WP_059132050.1 MULTISPECIES: helix-turn-helix transcriptional regulator [un... 3185.2e-36
WP_055564110.1 MULTISPECIES: helix-turn-helix transcriptional regulator [St... 3186.4e-36
WP_151477642.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 3177.3e-36
WP_149828339.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 3177.4e-36

PSORT result

LocalizationCertaintyPSORT said
Not Clear