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IDCP970_11795 TypeCDS
From2937966 nt length906
To2937061 aa length301
GenetruB pI6.66
DefinitiontRNA pseudouridine(55) synthase TruB M.W (Da)32001
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2548 putative tRNA pseudouridine synthase5130.0e+00
coelSCO5709 probable tRNA pseudouridine synthase5030.0e+00
sgrSGR_1808 putative tRNA pseudouridine synthase5010.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

TruB_N1TruB family pseudouridylate synthase (N terminal domain)31-187159.19.5e-47

TruB_C_21tRNA pseudouridylate synthase B C-terminal domain188-23048.29.2e-13

TruB_C1tRNA Pseudouridine synthase II, C terminal243-30147.79.8e-13

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_098245109.1 tRNA pseudouridine(55) synthase TruB [Streptomyces formicae]... 14510.0e+00
WP_055536296.1 tRNA pseudouridine(55) synthase TruB [Streptomyces alboniger... 14160.0e+00
WP_150172851.1 MULTISPECIES: tRNA pseudouridine(55) synthase TruB [Streptom... 14140.0e+00
WP_150215876.1 tRNA pseudouridine(55) synthase TruB [Streptomyces venezuela... 14140.0e+00
WP_055563130.1 tRNA pseudouridine(55) synthase TruB [Streptomyces atriruber... 14110.0e+00
WP_150186516.1 tRNA pseudouridine(55) synthase TruB [Streptomyces venezuela... 14100.0e+00
WP_127913110.1 tRNA pseudouridine(55) synthase TruB [Streptomyces huasconen... 14080.0e+00
WP_030784420.1 tRNA pseudouridine(55) synthase TruB [Streptomyces sp. NRRL ... 14080.0e+00
WP_069886139.1 tRNA pseudouridine(55) synthase TruB [Streptomyces luteocolo... 14010.0e+00
WP_125515434.1 tRNA pseudouridine(55) synthase TruB [Streptomyces sp. WAC 0... 13910.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear