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IDCP970_11825 TypeCDS
From2944140 nt length501
To2943640 aa length166
GenerimP pI4.46
Definitionribosome maturation factor RimP M.W (Da)18603
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2554 hypothetical protein2598.0e-91
coelSCO5703 hypothetical protein2483.0e-86
sgrSGR_1814 conserved hypothetical protein2482.0e-86

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

DUF1501RimP N-terminal domain12-8583.79.1e-24

DUF150_C1RimP C-terminal SH3 domain88-15657.11.5e-15

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_055563135.1 ribosome maturation factor RimP [Streptomyces atriruber] 7935.2e-107
WP_098245104.1 ribosome maturation factor RimP [Streptomyces formicae] >gb 7832.0e-105
WP_150172839.1 MULTISPECIES: ribosome maturation factor RimP [Streptomyces]... 7606.4e-102
WP_058845528.1 ribosome maturation factor RimP [Streptomyces silvensis] >gb... 7591.1e-101
WP_127913227.1 ribosome maturation factor RimP [Streptomyces huasconensis] 7562.7e-101
WP_030567069.1 ribosome maturation factor RimP [Streptomyces aureocirculatu... 7554.4e-101
WP_157169739.1 ribosome maturation factor RimP [Streptomyces sp. p1417] >gb... 7545.5e-101
WP_150215880.1 ribosome maturation factor RimP [Streptomyces venezuelae] >g... 7521.1e-100
WP_150186511.1 ribosome maturation factor RimP [Streptomyces venezuelae] >g... 7492.9e-100
WP_164319912.1 ribosome maturation factor RimP [Streptomyces aureoverticill... 7477.1e-100

PSORT result

LocalizationCertaintyPSORT said
Not Clear