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IDCP970_11945 TypeCDS
From2976976 nt length1254
To2975723 aa length417
Gene pI6.27
Definitionspermidine/putrescine ABC transporter substrate-binding protein M.W (Da)45850
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2591 putative polyamine ABC transporter substrate-binding protein6420.0e+00
coelSCO5667 putative ABC-transporter polyamine-binding lipop rotein6320.0e+00
sgrSGR_1837 putative polyamine ABC transporter substrate-binding protein6740.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

SBP_bac_81Bacterial extracellular solute-binding protein101-376106.71.8e-30

SBP_bac_61Bacterial extracellular solute-binding protein140-37669.92.2e-19

SBP_bac_11Bacterial extracellular solute-binding protein96-35059.36.1e-16

SBP_bac_111Bacterial extracellular solute-binding protein196-35629.94.6e-07

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_098245083.1 extracellular solute-binding protein [Streptomyces formicae]... 18070.0e+00
WP_055697417.1 spermidine/putrescine ABC transporter substrate-binding prot... 17260.0e+00
WP_069885783.1 spermidine/putrescine ABC transporter substrate-binding prot... 17180.0e+00
WP_127910256.1 spermidine/putrescine ABC transporter substrate-binding prot... 17140.0e+00
WP_150215906.1 extracellular solute-binding protein [Streptomyces venezuela... 17130.0e+00
WP_150172786.1 MULTISPECIES: extracellular solute-binding protein [Streptom... 17050.0e+00
WP_150186485.1 extracellular solute-binding protein [Streptomyces venezuela... 17030.0e+00
WP_055565272.1 spermidine/putrescine ABC transporter substrate-binding prot... 17000.0e+00
WP_076684266.1 MULTISPECIES: spermidine/putrescine ABC transporter substrat... 16890.0e+00
WP_136241696.1 spermidine/putrescine ABC transporter substrate-binding prot... 16820.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear