-- | --

IDCP970_12010 TypeCDS
From2991451 nt length546
To2991996 aa length181
Gene pI5.28
DefinitionLrp/AsnC family transcriptional regulator M.W (Da)19394
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2611 putative AsnC-family transcriptional regulator2902.0e-102
coelSCO5656 transcriptional regulatoty protein2885.0e-102
sgrSGR_1846 putative AsnC-family transcriptional regulator2913.0e-103

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

AsnC_trans_reg1Lrp/AsnC ligand binding domain101-17059.32.8e-16

HTH_AsnC-type1AsnC-type helix-turn-helix domain37-7654.48e-15

HTH_241Winged helix-turn-helix DNA-binding38-8137.71.1e-09

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_098245070.1 Lrp/AsnC family transcriptional regulator [Streptomyces form... 8289.2e-112
WP_079036554.1 MULTISPECIES: Lrp/AsnC family transcriptional regulator [Str... 7741.3e-103
APY90768.1 AsnC family transcriptional regulator [Streptomyces alfalfae] >gb... 7611.0e-101
WP_030675849.1 MULTISPECIES: Lrp/AsnC family transcriptional regulator [unc... 7323.4e-97
WP_079074906.1 Lrp/AsnC family transcriptional regulator [Streptomyces atri... 7272.0e-96
WP_127911332.1 Lrp/AsnC family transcriptional regulator [Streptomyces huas... 7262.9e-96
WP_067274464.1 Lrp/AsnC family transcriptional regulator [Streptomyces jedd... 7254.5e-96
WP_150172765.1 MULTISPECIES: Lrp/AsnC ligand binding domain-containing prot... 7193.6e-95
7194.9e-95
WP_181655730.1 Lrp/AsnC family transcriptional regulator [Streptomyces sp. ... 7124.6e-94

PSORT result

LocalizationCertaintyPSORT said
Not Clear