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IDCP970_12215 TypeCDS
From3032110 nt length1554
To3030557 aa length517
Gene pI9.67
Definitionsignal recognition particle protein M.W (Da)55552
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2648 putative signal recognition particle, subunit SRP548560.0e+00
coelSCO5586 signal recognition particle protein8490.0e+00
sgrSGR_1892 putative signal recognition particle8550.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

SRP541SRP54-type protein, GTPase domain100-298227.21.4e-67

SRP_SPB1Signal peptide binding domain333-430104.63.5e-30

SRP54_N1SRP54-type protein, helical bundle domain5-8274.17.8e-21

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_098245039.1 signal recognition particle protein [Streptomyces formicae] ... 22680.0e+00
WP_150186446.1 signal recognition particle protein [Streptomyces venezuelae... 22640.0e+00
WP_150215969.1 signal recognition particle protein [Streptomyces venezuelae... 22600.0e+00
WP_150172696.1 MULTISPECIES: signal recognition particle protein [Streptomy... 22500.0e+00
WP_069886328.1 signal recognition particle protein [Streptomyces luteocolor... 22460.0e+00
WP_030787574.1 signal recognition particle protein [Streptomyces sp. NRRL S... 22380.0e+00
WP_150477386.1 signal recognition particle protein [Streptomyces alboniger]... 22300.0e+00
WP_125515353.1 signal recognition particle protein [Streptomyces sp. WAC 01... 22290.0e+00
WP_160507448.1 signal recognition particle protein [Streptomyces sp. BA2] >... 22210.0e+00
WP_147979871.1 signal recognition particle protein [Streptomyces sp. ms191]... 22130.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear