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IDCP970_12320 TypeCDS
From3057168 nt length594
To3056575 aa length197
GenersmD pI5.83
Definition16S rRNA (guanine(966)-N(2))-methyltransferase RsmD M.W (Da)21069
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2670 putative RNA methylase3208.0e-114
coelSCO5567 putative methylase3142.0e-111
sgrSGR_1913 putative RNA methylase3163.0e-112

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Cons_hypoth951Conserved hypothetical protein 952-183173.82.8e-51

MTS1Methyltransferase small domain45-13025.68.1e-06

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_098245019.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD [Strepto... 8933.2e-121
WP_150172658.1 MULTISPECIES: 16S rRNA (guanine(966)-N(2))-methyltransferase... 8779.6e-119
WP_150215987.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD [Strepto... 8733.2e-118
WP_055698129.1 MULTISPECIES: 16S rRNA (guanine(966)-N(2))-methyltransferase... 8733.7e-118
WP_055564474.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD [Strepto... 8716.4e-118
WP_127912076.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD [Strepto... 8641.0e-116
WP_150186430.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD [Strepto... 8631.1e-116
WP_135336260.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD [Strepto... 8612.7e-116
WP_125515335.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD [Strepto... 8612.7e-116
WP_030787510.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD [Strepto... 8603.3e-116

PSORT result

LocalizationCertaintyPSORT said
Not Clear