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IDCP970_13725 TypeCDS
From3384914 nt length2037
To3382878 aa length678
Gene pI9.7
Definitiontranscription termination factor Rho M.W (Da)72860
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2915 putative transcription termination factor Rho8000.0e+00
coelSCO5357 SCBAC5H2.26 rho transcription terminator factor (fragment)9200.0e+00
sgrSGR_2179 putative transcription termination factor Rho7610.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Rho_RNA_bind1Rho termination factor, RNA-binding domain304-37896.65.8e-28

ATP-synt_ab1ATP synthase alpha/beta family, nucleotide-binding domain409-61374.41e-20

Rho_N1Rho termination factor, N-terminal domain39-7745.55.1e-12

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_098244792.1 transcription termination factor Rho [Streptomyces formicae]... 20790.0e+00
WP_030792103.1 transcription termination factor Rho [Streptomyces sp. NRRL ... 20720.0e+00
WP_026246753.1 MULTISPECIES: transcription termination factor Rho [unclassi... 20670.0e+00
WP_111668298.1 MULTISPECIES: transcription termination factor Rho [unclassi... 20670.0e+00
WP_161304955.1 transcription termination factor Rho [Streptomyces sp. SID57... 20630.0e+00
WP_164303110.1 transcription termination factor Rho [Streptomyces sp. SID14... 20610.0e+00
WP_062774023.1 transcription termination factor Rho [Streptomyces sp. NRRL ... 20590.0e+00
WP_136240774.1 transcription termination factor Rho [Streptomyces sp. A1499... 20590.0e+00
WP_076684483.1 MULTISPECIES: transcription termination factor Rho [Streptom... 20580.0e+00
WP_150216188.1 transcription termination factor Rho [Streptomyces venezuela... 20560.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear