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IDCP970_15650 TypeCDS
From3824363 nt length204
To3824160 aa length67
Gene pI4.56
Definitioncold-shock protein M.W (Da)7235
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4776 putative cold shock protein1351.0e-44
coelSCO3748 f40 cold shock protein1292.0e-42
sgrSGR_5495 putative cold shock protein1323.0e-43

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

CSD1'Cold-shock' DNA-binding domain3-65107.91.7e-31

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_055568178.1 MULTISPECIES: cold-shock protein [Streptomyces] >gb 3404.3e-41
WP_028811307.1 MULTISPECIES: cold-shock protein [Streptomyces] >gb 3404.9e-41
WP_010986199.1 MULTISPECIES: cold-shock protein [Streptomyces] >gb 3396.0e-41
WP_062214946.1 cold-shock protein [Streptomyces sp. NBRC 109706] 3389.0e-41
WP_019063123.1 MULTISPECIES: cold-shock protein [Streptomyces] >emb 3389.5e-41
WP_150185948.1 cold shock domain-containing protein [Streptomyces venezuela... 3381.0e-40
WP_030072012.1 cold-shock protein [Streptomyces natalensis] >gb 3381.1e-40
WP_030989011.1 cold-shock protein [Streptomyces sp. NRRL S-1813] 3371.2e-40
WP_009717734.1 MULTISPECIES: cold-shock protein [Streptomyces] >gb 3371.2e-40
WP_009715709.1 MULTISPECIES: cold-shock protein [Streptomyces] >gb 3371.3e-40

PSORT result

LocalizationCertaintyPSORT said
Not Clear