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IDCP970_16760 TypeCDS
From4051145 nt length1302
To4052446 aa length433
Gene pI10.88
Definitionhelix-turn-helix domain-containing protein M.W (Da)47084
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_3450 hypothetical protein3876.0e-134
coelSCO4810 hypothetical protein3342.0e-113
sgrSGR_2721 conserved hypothetical protein3495.0e-118

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_31Helix-turn-helix16-6238.11.2e-09

HTH_311Helix-turn-helix domain16-6735.41e-08

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_098244314.1 helix-turn-helix domain-containing protein [Streptomyces for... 15710.0e+00
WP_150216658.1 helix-turn-helix domain-containing protein [Streptomyces ven... 12532.3e-168
WP_161236171.1 MULTISPECIES: helix-turn-helix domain-containing protein [un... 12002.5e-160
WP_150171231.1 helix-turn-helix domain-containing protein [Streptomyces ven... 12042.7e-160
WP_160506737.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 11825.8e-158
WP_135335968.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 11423.0e-152
WP_127831991.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 10755.9e-142
WP_125514544.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 10751.6e-141
WP_168510454.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 10191.8e-133
WP_099925442.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 10151.1e-132

PSORT result

LocalizationCertaintyPSORT said
Not Clear