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IDCP970_17425 TypeCDS
From4192164 nt length3486
To4188679 aa length1161
GenerpoB pI4.55
DefinitionDNA-directed RNA polymerase subunit beta M.W (Da)128039
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4914 RNA polymerase beta subunit22860.0e+00
coelSCO4654 DNA-directed RNA polymerase beta chain22620.0e+00
sgrSGR_2869 putative RNA polymerase beta subunit22890.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

RNA_pol_Rpb2_61RNA polymerase Rpb2, domain 6630-1047516.64.3e-155

RNA_pol_Rpb2_21RNA polymerase Rpb2, domain 2169-365106.51.3e-30

RNA_pol_Rpb2_31RNA polymerase Rpb2, domain 3424-49296.11.1e-27

RNA_pol_Rpb2_71RNA polymerase Rpb2, domain 71049-112394.92.9e-27

RNA_pol_Rpb2_451RNA polymerase beta subunit external 1 domain502-56889.01.9e-25

RNA_pol_Rpb2_11RNA polymerase beta subunit38-40975.24.7e-21

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_055564544.1 DNA-directed RNA polymerase subunit beta [Streptomyces atrir... 57050.0e+00
WP_098244238.1 DNA-directed RNA polymerase subunit beta [Streptomyces formi... 57030.0e+00
WP_150185734.1 DNA-directed RNA polymerase subunit beta [Streptomyces venez... 57010.0e+00
WP_062780305.1 MULTISPECIES: DNA-directed RNA polymerase subunit beta [Stre... 57000.0e+00
WP_150171069.1 MULTISPECIES: DNA-directed RNA polymerase subunit beta [Stre... 56950.0e+00
WP_125514464.1 DNA-directed RNA polymerase subunit beta [Streptomyces sp. W... 56930.0e+00
WP_030782595.1 MULTISPECIES: DNA-directed RNA polymerase subunit beta [Stre... 56920.0e+00
WP_150216775.1 DNA-directed RNA polymerase subunit beta [Streptomyces venez... 56920.0e+00
WP_127910228.1 DNA-directed RNA polymerase subunit beta [Streptomyces huasc... 56920.0e+00
WP_164321749.1 DNA-directed RNA polymerase subunit beta [Streptomyces aureo... 56800.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear