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IDCP970_22635 TypeCDS
From5285503 nt length3981
To5281523 aa length1326
GenehrpA pI7.42
DefinitionATP-dependent RNA helicase HrpA M.W (Da)150771
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4128 putative ATP-dependent helicase24250.0e+00
coelSCO4092 ATP-dependent helicase24090.0e+00
sgrSGR_3884 putative ATP-dependent helicase22440.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

DUF34181Domain of unknown function (DUF3418)730-1322757.01.5e-227

OB_NTP_bind1Oligonucleotide/oligosaccharide-binding (OB)-fold625-71566.81.7e-18

HA21Helicase associated domain (HA2)468-56266.72e-18

Helicase_C1Helicase conserved C-terminal domain285-40543.72.9e-11

DEAD1DEAD/DEAH box helicase88-23430.62.5e-07

AAA_191AAA domain90-21027.63.1e-06

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_098243481.1 ATP-dependent RNA helicase HrpA [Streptomyces formicae] >gb 65920.0e+00
WP_150217614.1 ATP-dependent RNA helicase HrpA [Streptomyces venezuelae] >g... 64270.0e+00
WP_055568365.1 ATP-dependent RNA helicase HrpA [Streptomyces atriruber] 64240.0e+00
WP_055701075.1 MULTISPECIES: ATP-dependent RNA helicase HrpA [Streptomyces] 64080.0e+00
WP_030790307.1 ATP-dependent RNA helicase HrpA [Streptomyces sp. NRRL S-920... 63900.0e+00
WP_150184914.1 ATP-dependent RNA helicase HrpA [Streptomyces venezuelae] >g... 63800.0e+00
WP_150477059.1 ATP-dependent RNA helicase HrpA [Streptomyces alboniger] >gb... 63670.0e+00
WP_125513806.1 ATP-dependent RNA helicase HrpA [Streptomyces sp. WAC 01529]... 63570.0e+00
WP_076685436.1 MULTISPECIES: ATP-dependent RNA helicase HrpA [Streptomyces]... 63510.0e+00
WP_127911528.1 ATP-dependent RNA helicase HrpA [Streptomyces huasconensis] 63480.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear