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IDCP970_23040 TypeCDS
From5372175 nt length1632
To5370544 aa length543
Gene pI7.01
Definitiontype VI secretion protein M.W (Da)57524
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4103 putative membrane protein4473.0e-153
coelSCO4126 putative membrane protein5750.0e+00
sgrSGR_3915 putative membrane protein4041.0e-136

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result

no hits.

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_098243447.1 type VI secretion protein [Streptomyces formicae] >gb 18830.0e+00
WP_160505903.1 type VI secretion protein [Streptomyces sp. BA2] >gb 14420.0e+00
WP_143639390.1 type VI secretion protein [Streptomyces sp. IB201691-2A2] >l... 13700.0e+00
WP_107015207.1 type VI secretion protein [Streptomyces dioscori] >gb 13540.0e+00
WP_171117942.1 MULTISPECIES: type VI secretion protein [unclassified Strept... 13267.6e-177
WP_161166798.1 TraM recognition domain-containing protein [Streptomyces sp.... 13211.0e-175
WP_059126899.1 hypothetical protein [Streptomyces sp. NRRL F-5122] >gb 13193.5e-175
WP_115975696.1 type VI secretion protein [Streptomyces sp. 3212.3] >gb 13161.1e-174
WP_121893645.1 type VI secretion protein [Streptomyces shenzhenensis] >gb 13018.1e-173
WP_067120489.1 type VI secretion protein [Streptomyces yokosukanensis] >gb 12913.4e-171

PSORT result

LocalizationCertaintyPSORT said
Not Clear