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IDCP970_23095 TypeCDS
From5382987 nt length852
To5382136 aa length283
Gene pI8.52
DefinitionXRE family transcriptional regulator M.W (Da)31433
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4087 putative DNA-binding protein3924.0e-139
coelSCO4998 hypothetical protein2974.0e-102
sgrSGR_3948 putative DNA-binding protein2719.0e-92

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

DUF57531Domain of unknown function (DUF5753)101-277158.21.7e-46

HTH_311Helix-turn-helix domain15-6946.14.8e-12

HTH_31Helix-turn-helix18-6835.67.3e-09

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_098243440.1 helix-turn-helix transcriptional regulator [Streptomyces for... 12914.6e-179
WP_062723859.1 helix-turn-helix transcriptional regulator [Streptomyces cae... 10261.2e-138
WP_138050140.1 helix-turn-helix domain-containing protein [Streptomyces mon... 10227.2e-138
WP_159690271.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 10201.1e-137
WP_119105200.1 helix-turn-helix transcriptional regulator [Streptomyces spo... 10159.9e-137
WP_100826987.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 10121.6e-136
WP_135336457.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 10061.1e-135
WP_165344418.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 9982.3e-134
WP_100107932.1 helix-turn-helix transcriptional regulator [Streptomyces peu... 9982.4e-134
WP_160505886.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 9963.4e-134

PSORT result

LocalizationCertaintyPSORT said
Not Clear