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IDCP970_23935 TypeCDS
From5541917 nt length204
To5542120 aa length67
Gene pI4.58
Definitioncold-shock protein M.W (Da)7371
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_3932 putative cold shock protein1343.0e-44
coelSCO4295 scoF4 cold shock protein1342.0e-44
sgrSGR_3226 putative cold shock protein1389.0e-46

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

CSD1'Cold-shock' DNA-binding domain3-64106.06.4e-31

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_005315736.1 MULTISPECIES: cold-shock protein [Streptomyces] >gb 3474.2e-42
WP_003967346.1 MULTISPECIES: cold-shock protein [Bacteria] >gb 3474.8e-42
WP_037910665.1 MULTISPECIES: cold-shock protein [Streptomyces] >gb 3459.1e-42
WP_030009783.1 MULTISPECIES: cold-shock protein [Streptomyces] >gb 3451.0e-41
WP_046709519.1 cold-shock protein [Streptomyces europaeiscabiei] 3441.1e-41
WP_010474007.1 MULTISPECIES: cold-shock protein [Streptomyces] >gb 3441.1e-41
WP_046911137.1 MULTISPECIES: cold-shock protein [Streptomyces] >gb 3441.1e-41
WP_153487255.1 MULTISPECIES: cold shock domain-containing protein [Streptom... 3441.3e-41
WP_015035246.1 MULTISPECIES: cold-shock protein [Streptomyces] >gb 3441.4e-41
WP_028811121.1 cold-shock protein [Streptomyces flavidovirens] 3431.6e-41

PSORT result

LocalizationCertaintyPSORT said
Not Clear