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IDCP970_24575 TypeCDS
From5680230 nt length1035
To5679196 aa length344
Gene pI7.29
Definitionhelix-turn-helix domain-containing protein M.W (Da)37300
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_3832 putative AraC-family transcriptional regulator5380.0e+00
coelSCO4413 putative araC family transcriptional regulatory protein5380.0e+00
sgrSGR_3046 putative AdpA-family transcriptional regulator5400.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_181Helix-turn-helix domain252-33076.21.8e-21

HTH_AraC2Bacterial regulatory helix-turn-helix proteins, AraC family242-280, 292-33062.13.4e-17

DJ-1_PfpI1DJ-1/PfpI family17-19148.67.9e-13

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_098243193.1 helix-turn-helix domain-containing protein [Streptomyces for... 15180.0e+00
WP_016644551.1 helix-turn-helix domain-containing protein [Streptomyces aur... 14560.0e+00
WP_087887655.1 helix-turn-helix domain-containing protein [Streptomyces alb... 14300.0e+00
ARX84271.1 AraC family transcriptional regulator [Streptomyces alboflavus] 14300.0e+00
WP_164323814.1 helix-turn-helix domain-containing protein [Streptomyces aur... 14230.0e+00
WP_033264405.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 14230.0e+00
WP_127912784.1 helix-turn-helix domain-containing protein [Streptomyces hua... 14210.0e+00
WP_151480014.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 14010.0e+00
WP_150169134.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 13980.0e+00
WP_030686144.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 13940.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear