ID	CP970_26205	Type	CDS
From	6067713	nt length	939
To	6066775	aa length	312
Gene		pI	4.42
Definition	RNA polymerase sigma factor SigF	M.W (Da)	34532
Note		AseI frg.
SignalP v.4.0	Non-secretory protein | plot	Category

Orthologs (if any)

Pfam search result

	Model	No.	Description	Position (aa)	Score	E-value
	Sigma70_r4	1	Sigma-70, region 4	258-306	70.8	5.1e-20
	Sigma70_r3	1	Sigma-70 region 3	171-237	61.2	7.5e-17
	Sigma70_r2	1	Sigma-70 region 2	91-160	57.1	1.2e-15
	Sigma70_r4_2	1	Sigma-70, region 4	257-304	41.5	8.1e-11
	HTH_23	1	Homeodomain-like domain	263-299	28.3	1.1e-06

BLAST search result (top 10 hits)

ID	Description	Score	E-value
WP_098242938.1	RNA polymerase sigma factor SigF [Streptomyces formicae] >gb...	1576	0.0e+00
WP_055698980.1	MULTISPECIES: RNA polymerase sigma factor SigF [Streptomyces...	1513	0.0e+00
WP_055567704.1	RNA polymerase sigma factor SigF [Streptomyces atriruber]	1482	0.0e+00
WP_127911898.1	RNA polymerase sigma factor SigF [Streptomyces huasconensis]	1480	0.0e+00
WP_150218109.1	SigB/SigF/SigG family RNA polymerase sigma factor [Streptomy...	1478	0.0e+00
WP_150184456.1	SigB/SigF/SigG family RNA polymerase sigma factor [Streptomy...	1477	0.0e+00
WP_135332047.1	RNA polymerase sigma factor SigF [Streptomyces sp. MZ04] >lc...	1472	0.0e+00
WP_150168707.1	MULTISPECIES: SigB/SigF/SigG family RNA polymerase sigma fac...	1471	0.0e+00
WP_055529413.1	SigB/SigF/SigG family RNA polymerase sigma factor [Streptomy...	1471	0.0e+00
WP_037662155.1	RNA polymerase sigma factor SigF [Streptomyces aurantiacus]	1467	0.0e+00

PSORT result

Localization	Certainty	PSORT said
Not Clear

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