-- | --

IDCP970_27085 TypeCDS
From6281574 nt length801
To6280774 aa length266
Gene pI10.29
Definitionhelix-turn-helix domain-containing protein M.W (Da)28565
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_3139 hypothetical protein1979.0e-63
coelSCO4676 hypothetical protein2391.0e-79
sgrSGR_4331 conserved hypothetical protein1298.0e-36

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result

no hits.

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_098242818.1 DNA-binding protein [Streptomyces formicae] >gb 7772.2e-101
WP_127828834.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 6039.7e-75
WP_132852763.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 5792.3e-71
WP_138960280.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 5687.6e-70
QCX77269.1 hypothetical protein C9F11_18085 [Streptomyces sp. YIM 121038] 5708.9e-70
WP_086171189.1 DNA-binding protein [Streptomyces pharetrae] >gb 5645.4e-69
WP_055564073.1 hypothetical protein [Streptomyces atriruber] 5646.1e-69
WP_100568918.1 DNA-binding protein [Streptomyces sp. CB01373] >gb 5636.4e-69
WP_052413757.1 DNA-binding protein [Streptomyces glaucescens] 5638.4e-69
WP_160505613.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 5611.4e-68

PSORT result

LocalizationCertaintyPSORT said
Not Clear