-- | --

IDCP970_27120 TypeCDS
From6288058 nt length642
To6288699 aa length213
Gene pI6.85
DefinitionHTH domain-containing protein M.W (Da)22497
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5141 putative differentiation regulon (IclR-family transcriptional regulator)3661.0e-131
coelSCO2935 putative transcriptional regulator3591.0e-128
sgrSGR_4602 putative IclR-family transcriptional regulator3784.0e-136

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_IclR1IclR helix-turn-helix domain8-5854.67e-15

HTH_111HTH domain14-5024.02.7e-05

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_098242812.1 helix-turn-helix domain-containing protein [Streptomyces for... 7003.2e-91
WP_062776326.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 6985.1e-91
WP_055702359.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 6942.2e-90
WP_160505296.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 6915.8e-90
WP_164324507.1 helix-turn-helix domain-containing protein [Streptomyces aur... 6891.2e-89
WP_055568198.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 6891.4e-89
WP_058848405.1 helix-turn-helix domain-containing protein [Streptomyces sil... 6891.5e-89
WP_030568766.1 helix-turn-helix domain-containing protein [Streptomyces aur... 6872.1e-89
WP_030794946.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 6872.2e-89
WP_030680755.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 6847.4e-89

PSORT result

LocalizationCertaintyPSORT said
Not Clear