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IDCP970_28270 TypeCDS
From6523713 nt length651
To6523063 aa length216
Gene pI10.89
Definitionlipopolysaccharide biosynthesis protein M.W (Da)21717
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5353 putative secreted protein1547.0e-48
coelSCO2712 putative membrane protein1534.0e-47
sgrSGR_524 conserved hypothetical protein1425.0e-43

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result

no hits.

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_098242627.1 lipopolysaccharide biosynthesis protein [Streptomyces formic... 5943.8e-75
NEA02409.1 lipopolysaccharide biosynthesis protein [Streptomyces sp. SID1011... 5414.9e-68
WP_165284276.1 lipopolysaccharide biosynthesis protein, partial [Streptomyc... 5427.8e-68
WP_055569782.1 lipopolysaccharide biosynthesis protein [Streptomyces atriru... 5441.4e-67
WP_150185298.1 lipopolysaccharide biosynthesis protein [Streptomyces venezu... 5432.3e-67
WP_150170300.1 MULTISPECIES: lipopolysaccharide biosynthesis protein [Strep... 5399.1e-67
WP_150217203.1 lipopolysaccharide biosynthesis protein [Streptomyces venezu... 5363.0e-66
WP_055702928.1 MULTISPECIES: lipopolysaccharide biosynthesis protein [Strep... 5267.9e-65
QEV61011.1 lipopolysaccharide biosynthesis protein [Streptomyces spectabilis... 5041.1e-61
WP_144319926.1 lipopolysaccharide biosynthesis protein [Streptomyces specta... 5032.2e-61

PSORT result

LocalizationCertaintyPSORT said
Not Clear