-- | --

IDCP970_28575 TypeCDS
From6595026 nt length1200
To6593827 aa length399
Gene pI4.51
DefinitionROK family transcriptional regulator M.W (Da)40340
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5384 putative ROK-family transcriptional regulator3649.0e-125
coelSCO2657 putative ROK-family regulatory protein3491.0e-118
sgrSGR_4874 putative ROK-family transcriptional regulator3725.0e-128

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

ROK1ROK family105-347102.72.5e-29

MarR_21MarR family27-7235.67.2e-09

HTH_241Winged helix-turn-helix DNA-binding26-6925.57e-06

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_098242576.1 ROK family transcriptional regulator [Streptomyces formicae]... 15440.0e+00
WP_055702068.1 ROK family transcriptional regulator [Streptomyces silaceus] 15140.0e+00
WP_069885646.1 ROK family transcriptional regulator [Streptomyces luteocolo... 15130.0e+00
WP_160505076.1 ROK family protein [Streptomyces sp. BA2] >gb 14780.0e+00
WP_150167804.1 ROK family protein [Streptomyces venezuelae] >gb 14770.0e+00
WP_161236372.1 MULTISPECIES: ROK family protein [unclassified Streptomyces]... 14690.0e+00
WP_150184149.1 ROK family protein [Streptomyces venezuelae] >gb 14590.0e+00
WP_150218619.1 ROK family protein [Streptomyces venezuelae] >gb 14450.0e+00
WP_125512814.1 ROK family transcriptional regulator [Streptomyces sp. WAC 0... 14380.0e+00
WP_030790990.1 ROK family transcriptional regulator [Streptomyces sp. NRRL ... 14250.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear