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IDCP970_29905 TypeCDS
From6897316 nt length402
To6897717 aa length133
Gene pI6.23
Definitionhelix-turn-helix domain-containing protein M.W (Da)14040
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2340 putative substrate-binding protein2374.0e-83
coelSCO3703 putative substrate binding protein2325.0e-81
sgrSGR_3499 putative substrate-binding protein2376.0e-83

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

TOBE1TOBE domain68-13067.41e-18

HTH_171Helix-turn-helix domain4-4943.72.3e-11

MerR1MerR family regulatory protein5-4038.76.3e-10

MerR_11MerR HTH family regulatory protein4-4729.65.4e-07

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
ATL27531.1 Molybdate-binding domain of ModE [Streptomyces formicae] 6689.9e-89
WP_098247212.1 helix-turn-helix transcriptional regulator [Streptomyces for... 6642.1e-88
WP_055698368.1 MULTISPECIES: helix-turn-helix transcriptional regulator [St... 6381.7e-84
WP_125512613.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 6381.8e-84
WP_041998437.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 6372.5e-84
WP_052854238.1 MULTISPECIES: helix-turn-helix transcriptional regulator [St... 6363.8e-84
WP_161694461.1 TOBE domain-containing protein [Streptomyces sp. YC537] >gb 6355.2e-84
WP_136326814.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 6356.2e-84
WP_145767827.1 TOBE domain-containing protein [Streptomyces brevispora] >lc... 6331.1e-83
WP_123528936.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 6331.1e-83

PSORT result

LocalizationCertaintyPSORT said
Not Clear