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IDCP970_34130 TypeCDS
From7825227 nt length1146
To7826372 aa length381
Gene pI6.12
DefinitionGAF domain-containing protein M.W (Da)40777
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6476 putative two-component system sensor kinase6480.0e+00
coelSCO1802 putative two-component system sensor kinase (fragment)6290.0e+00
sgrSGR_5694 putative two-component system sensor kinase6230.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

GAF_21GAF domain23-16679.82.4e-22

HisKA_31Histidine kinase183-25063.61.8e-17

GAF1GAF domain26-16659.55.4e-16

HATPase_c1Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase291-37939.95.1e-10

GAF_31GAF domain26-16835.51.1e-08

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_098241663.1 GAF domain-containing sensor histidine kinase [Streptomyces ... 18030.0e+00
WP_069887226.1 GAF domain-containing sensor histidine kinase [Streptomyces ... 17280.0e+00
WP_087883522.1 GAF domain-containing sensor histidine kinase [Streptomyces ... 17040.0e+00
WP_030361383.1 MULTISPECIES: GAF domain-containing sensor histidine kinase ... 17030.0e+00
WP_062783853.1 MULTISPECIES: GAF domain-containing sensor histidine kinase ... 16990.0e+00
WP_016638506.1 GAF domain-containing sensor histidine kinase [Streptomyces ... 16840.0e+00
WP_161271535.1 MULTISPECIES: GAF domain-containing protein [unclassified St... 16820.0e+00
WP_150166263.1 GAF domain-containing protein [Streptomyces venezuelae] >gb 16800.0e+00
WP_164326115.1 GAF domain-containing protein [Streptomyces aureoverticillat... 16790.0e+00
WP_150183363.1 GAF domain-containing protein [Streptomyces venezuelae] >gb 16780.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear