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IDSACE_0348 TypeCDS
From384525 nt length909
To385433 aa length302
Gene pI9.94
Definitionprobable transcriptional regulator, LysR family M.W (Da)33147
Note AseI frg.B
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4996 putative LysR-family transcriptional regulator2554.0e-69
coelSCO4766 putative transcriptional regulator2341.0e-62
sgrSGR_2761 putative LysR-family transcriptional regulator2511.0e-67
scabSCAB36251 putative LysR-family transcriptional regulator2684.0e-73
saceSCAB36251 putative LysR-family transcriptional regulator2684.0e-73

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

LysR_substrate1LysR substrate binding domain90-293143.16.5e-42

HTH_11Bacterial regulatory helix-turn-helix protein, lysR family5-6377.07.2e-22

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_009946504.1 LysR family transcriptional regulator [Saccharopolyspora ery... 14550.0e+00
WP_093156361.1 LysR family transcriptional regulator [Saccharopolyspora ant... 10297.9e-139
WP_093355997.1 LysR family transcriptional regulator [Saccharopolyspora jia... 10281.2e-138
WP_019855866.1 LysR family transcriptional regulator [Actinopolyspora morti... 10211.5e-137
WP_043569327.1 LysR family transcriptional regulator [Actinopolyspora eryth... 10091.0e-135
WP_017972885.1 LysR family transcriptional regulator [Actinopolyspora halop... 10031.0e-134
WP_092524670.1 LysR family transcriptional regulator [Actinopolyspora sahar... 9993.1e-134
WP_092604426.1 LysR family transcriptional regulator [Actinopolyspora xinji... 9975.3e-134
SFT89103.1 DNA-binding transcriptional regulator, LysR family [Actinopolysp... 9901.4e-132
WP_092980459.1 LysR family transcriptional regulator [Actinopolyspora righe... 9881.5e-132

PSORT result

LocalizationCertaintyPSORT said
Not Clear