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IDSACE_0377 TypeCDS
From418496 nt length2769
To421264 aa length922
GenetopA pI6.69
DefinitionDNA topoisomerase I M.W (Da)101153
Note AseI frg.B
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4621 putative DNA topoisomerase I11050.0e+00
coelSCO3543 probable DNA topoisomerase I10000.0e+00
sgrSGR_3301 putative DNA topoisomerase I10750.0e+00
scabSCAB40781 putative DNA topoisomerase I11120.0e+00
saceSCAB40781 putative DNA topoisomerase I11120.0e+00
nfarnfa3670 putative DNA topoisomerase I12260.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Topoisom_bac1DNA topoisomerase137-579407.84.5e-122

Toprim_C_rpt4Topoisomerase C-terminal repeat625-678, 685-742, 747-801, 813-865225.53e-68

Toprim1Toprim domain2-12297.93e-28

Toprim_41Toprim domain59-11627.23.8e-06

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_009946467.1 DNA topoisomerase I [Saccharopolyspora erythraea] >emb 43940.0e+00
WP_010307984.1 DNA topoisomerase I [Saccharopolyspora spinosa] 39730.0e+00
WP_093268109.1 DNA topoisomerase I [Saccharopolyspora shandongensis] 39540.0e+00
SDY13865.1 DNA topoisomerase I [Saccharopolyspora shandongensis] 39540.0e+00
WP_093156593.1 DNA topoisomerase I [Saccharopolyspora antimicrobica] 39130.0e+00
WP_093356300.1 DNA topoisomerase I [Saccharopolyspora jiangxiensis] 39090.0e+00
SFO29649.1 DNA topoisomerase-1 [Saccharopolyspora antimicrobica] 39070.0e+00
WP_093415612.1 DNA topoisomerase I [Saccharopolyspora flava] 39040.0e+00
SEG82548.1 DNA topoisomerase I [Saccharopolyspora hirsuta] >emb 39030.0e+00
SFS57291.1 DNA topoisomerase I [Saccharopolyspora flava] 38940.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear