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IDSACE_0953 TypeCDS
From1068242 nt length2955
To1071196 aa length984
GenesbcC pI4.93
Definitionputative ATP-dependent dsDNA exonuclease M.W (Da)108544
Note AseI frg.H
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_7056 putative ATP-dependent dsDNA exonuclease1661.0e-41
coelSCO1300 putative exonuclease3091.0e-84
sgrSGR_6250 putative exonuclease1922.0e-49
scabSCAB77881 putative ATP-dependent dsDNA exonuclease4312.0e-121
saceSCAB77881 putative ATP-dependent dsDNA exonuclease4312.0e-121
nfarnfa47920 putative ATP-dependent dsDNA exonuclease4342.0e-122

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

AAA_231AAA domain6-22674.91.1e-20

SbcCD_C1Putative exonuclease SbcCD, C subunit883-94345.17.9e-12

AAA_291P-loop containing region of AAA domain3-5528.77.2e-07

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_009950672.1 exonuclease SbcC [Saccharopolyspora erythraea] >emb 36260.0e+00
WP_093349353.1 exonuclease SbcC [Saccharopolyspora jiangxiensis] >emb 24610.0e+00
WP_010694230.1 exonuclease SbcC [Saccharopolyspora spinosa] 24580.0e+00
WP_093152920.1 exonuclease SbcC [Saccharopolyspora antimicrobica] >emb 24430.0e+00
WP_093273517.1 exonuclease SbcC [Saccharopolyspora shandongensis] >emb 23230.0e+00
WP_093415104.1 exonuclease SbcC [Saccharopolyspora flava] >emb 22250.0e+00
WP_029719456.1 exonuclease SbcC [Saccharopolyspora rectivirgula] >gb 22140.0e+00
WP_092625590.1 exonuclease SbcC [Actinopolyspora mzabensis] >emb 17980.0e+00
WP_017976505.1 hypothetical protein [Actinopolyspora halophila] 16960.0e+00
WP_037307838.1 exonuclease SbcC [Saccharomonospora viridis] >gb 16800.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear