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IDSACE_1768 TypeCDS
From1946388 nt length933
To1947320 aa length310
Gene pI8.91
Definitionputative ECF-family RNA polymerase sigma factor M.W (Da)33809
Note AseI frg.G
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
sgrSGR_3571 putative RNA polymerase ECF-subfamily sigma factor2623.0e-71

*sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Sigma70_r21Sigma-70 region 28-7156.61.4e-15

Sigma70_r4_21Sigma-70, region 4107-15939.82.5e-10

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_009947373.1 RNA polymerase sigma-70 factor [Saccharopolyspora erythraea]... 13440.0e+00
CTQ93884.1 RNA polymerase sigma-70 factor [Kibdelosporangium sp. MJ126-NF4] 8278.3e-108
WP_042183921.1 RNA polymerase sigma-70 factor [Kibdelosporangium sp. MJ126-... 8269.1e-108
WP_092529966.1 RNA polymerase sigma-70 factor [Yuhushiella deserti] >emb 8251.2e-107
SDM26982.1 RNA polymerase, sigma subunit, ECF family [Allokutzneria albata] 7876.1e-102
WP_081900377.1 RNA polymerase sigma-70 factor [Allokutzneria albata] 7831.3e-100
WP_066997206.1 RNA polymerase sigma-70 factor [Streptomyces cellostaticus] ... 7631.9e-98
WP_075129498.1 RNA polymerase sigma-70 factor [Actinophytocola xanthii] >gb... 7531.1e-96
WP_037770979.1 MULTISPECIES: RNA polymerase sigma-70 factor [Streptomyces] ... 7511.8e-96
WP_093261816.1 RNA polymerase sigma-70 factor [Saccharopolyspora shandongen... 7486.9e-96

PSORT result

LocalizationCertaintyPSORT said
Not Clear