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IDSACE_1832 TypeCDS
From2015340 nt length1260
To2014081 aa length419
Gene pI5.39
Definitionputative ribonuclease D (partial match) M.W (Da)45479
Note AseI frg.G
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2231 putative ribonuclease D4126.0e-116
coelSCO6028 hypothetical protein3624.0e-101
sgrSGR_1476 putative ribonuclease D3789.0e-106
scabSCAB20891 putative ribonuclease D3618.0e-101
saceSCAB20891 putative ribonuclease D3618.0e-101
nfarnfa37400 putative RNase D3747.0e-105

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

DNA_pol_A_exo113'-5' exonuclease33-196116.97.2e-34

HRDC1HRDC domain238-30456.81.5e-15

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_009942701.1 ribonuclease D [Saccharopolyspora erythraea] >emb 16600.0e+00
WP_093264981.1 ribonuclease D [Saccharopolyspora shandongensis] 13720.0e+00
SDX27103.1 ribonuclease D [Saccharopolyspora shandongensis] 13650.0e+00
WP_044572866.1 ribonuclease D [Saccharopolyspora spinosa] 13470.0e+00
WP_093157508.1 ribonuclease D [Saccharopolyspora antimicrobica] 13440.0e+00
SFO51599.1 ribonuclease D [Saccharopolyspora antimicrobica] 13330.0e+00
WP_093416465.1 ribonuclease D [Saccharopolyspora flava] 13212.2e-179
WP_093355072.1 ribonuclease D [Saccharopolyspora jiangxiensis] 13177.0e-179
SFS66943.1 ribonuclease D [Saccharopolyspora flava] 13072.0e-177
SEG87462.1 ribonuclease D [Saccharopolyspora hirsuta] >emb 13063.3e-177

PSORT result

LocalizationCertaintyPSORT said
Not Clear