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IDSACE_2101 TypeCDS
From2285901 nt length294
To2286194 aa length97
Gene pI4.43
DefinitionDNA-directed RNA polymerase subunit omega M.W (Da)10503
Note AseI frg.G
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6872 RNA polymerase omega subunit1203.0e-29
coelSCO1478 putative RNA polymerase omega subunit1097.0e-26
sgrSGR_6056 putative RNA polymerase omega subunit1204.0e-29
scabSCAB75281 RNA polymerase omega subunit1211.0e-29
saceSCAB75281 RNA polymerase omega subunit1211.0e-29
nfarnfa36150 putative RNA polymerase omega subunit1272.0e-31

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

RNA_pol_Rpb61RNA polymerase Rpb629-9154.47.9e-15

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_009943020.1 DNA-directed RNA polymerase subunit omega [Saccharopolyspora... 4963.3e-64
WP_093154160.1 MULTISPECIES: DNA-directed RNA polymerase subunit omega [Sac... 4617.6e-59
WP_010310991.1 MULTISPECIES: DNA-directed RNA polymerase subunit omega [Sac... 4601.0e-58
WP_029722978.1 DNA-directed RNA polymerase subunit omega [Saccharopolyspora... 4572.7e-58
WP_084579136.1 DNA-directed RNA polymerase subunit omega [Kutzneria sp. 744... 4183.0e-52
EWM11728.1 DNA-directed RNA polymerase subunit omega [Kutzneria sp. 744] 4166.1e-52
AHH96129.1 hypothetical protein KALB_2761 [Kutzneria albida DSM 43870] 4158.1e-52
WP_075740370.1 MULTISPECIES: DNA-directed RNA polymerase subunit omega [Act... 4141.1e-51
AOS63118.1 DNA-directed RNA polymerase, omega subunit [Actinoalloteichus hym... 4113.2e-51
WP_035966866.1 DNA-directed RNA polymerase subunit omega [Kutzneria albida] 4061.4e-50

PSORT result

LocalizationCertaintyPSORT said
Not Clear