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IDSACE_2170 TypeCDS
From2356927 nt length717
To2356211 aa length238
Gene pI11.25
Definitionputative ABC-2 type transport system permease protein M.W (Da)24184
Note AseI frg.N
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6321 putative ABC transporter permease protein1392.0e-34
coelSCO1929 putative integral membrane transport protein1193.0e-28
sgrSGR_5592 putative ABC transporter permease protein1441.0e-35
scabSCAB69991 putative ABC transporter permease protein1378.0e-34
saceSCAB69991 1378.0e-34
nfarnfa35660 putative ABC transporter membrane protein1801.0e-46

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

ABC2_membrane1ABC-2 type transporter9-20155.35.1e-15

ABC2_membrane_31ABC-2 family transporter protein50-23139.72.7e-10

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011873586.1 multidrug ABC transporter permease [Saccharopolyspora erythr... 5495.7e-68
EQD87516.1 multidrug ABC transporter permease [Saccharopolyspora erythraea D... 5473.5e-67
WP_083822204.1 multidrug ABC transporter permease [Saccharopolyspora spinos... 4914.5e-59
WP_093418172.1 multidrug ABC transporter permease [Saccharopolyspora flava] 4671.6e-55
SFS69274.1 ABC-2 type transport system permease protein [Saccharopolyspora ... 4665.3e-55
WP_093155703.1 multidrug ABC transporter permease [Saccharopolyspora antimi... 4601.8e-54
WP_093348316.1 multidrug ABC transporter permease [Saccharopolyspora jiangx... 4602.1e-54
SEF65473.1 ABC-2 type transport system permease protein [Saccharopolyspora ... 4588.5e-54
SFO08004.1 ABC-2 type transport system permease protein [Saccharopolyspora ... 4571.5e-53
WP_093260361.1 multidrug ABC transporter permease [Saccharopolyspora shando... 4536.1e-53

PSORT result

LocalizationCertaintyPSORT said
Not Clear