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IDSACE_2173 TypeCDS
From2359718 nt length819
To2360536 aa length272
Gene pI7.4
Definitionprobable transcriptional regulator M.W (Da)28573
Note AseI frg.N
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6324 putative ArsR-family transcriptional regulator1949.0e-51
coelSCO1926 putative DNA-binding protein1664.0e-42
sgrSGR_5594 putative ArsR-family transcriptional regulator2132.0e-56
scabSCAB70021 putative ArsR-family transcriptional regulator1962.0e-51
saceSCAB70021 1962.0e-51
nfarnfa35610 putative DNA-binding protein1815.0e-47

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_111HTH domain31-7330.03.2e-07

HTH_241Winged helix-turn-helix DNA-binding38-7324.41.4e-05

HTH_51Bacterial regulatory protein, arsR family40-7322.19.5e-05

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_009942949.1 transcriptional regulator [Saccharopolyspora erythraea] >emb... 12407.3e-172
WP_010310690.1 transcriptional regulator [Saccharopolyspora spinosa] 10063.2e-136
WP_093260355.1 transcriptional regulator [Saccharopolyspora shandongensis] 10038.7e-136
SDW14256.1 transcriptional regulator [Saccharopolyspora shandongensis] 9941.6e-134
WP_093417140.1 transcriptional regulator [Saccharopolyspora flava] 9794.0e-132
WP_093155503.1 MULTISPECIES: transcriptional regulator [Saccharopolyspora] ... 9401.7e-126
WP_081855520.1 transcriptional regulator [Saccharopolyspora rectivirgula] 9002.8e-120
WP_092627696.1 transcriptional regulator [Actinopolyspora mzabensis] 8962.4e-119
SDK17874.1 transcriptional regulator [Actinopolyspora mzabensis] 8964.2e-119
SFC43345.1 transcriptional regulator [Saccharopolyspora jiangxiensis] 8798.9e-118

PSORT result

LocalizationCertaintyPSORT said
Not Clear