-- | --

IDSACE_2242 TypeCDS
From2430554 nt length882
To2429673 aa length293
Gene pI4.71
Definitionputative RecB family exonuclease M.W (Da)32798
Note AseI frg.N
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6672 hypothetical protein2962.0e-81
coelSCO1653 Hypothetical protein SCI41.362771.0e-75
sgrSGR_5851 conserved hypothetical protein2871.0e-78
scabSCAB73381 hypothetical protein2856.0e-78
saceSCAB73381 hypothetical protein2856.0e-78
nfarnfa31830 hypothetical protein3023.0e-83

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

PDDEXK_11PD-(D/E)XK nuclease superfamily20-266133.51.1e-38

Cas_Cas41Domain of unknown function DUF83150-26527.03.7e-06

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_009945878.1 exonuclease RecB [Saccharopolyspora erythraea] >emb 13980.0e+00
WP_010310566.1 exonuclease RecB [Saccharopolyspora spinosa] 12143.3e-167
WP_093155571.1 recombinase RecB [Saccharopolyspora antimicrobica] >emb 12091.9e-166
WP_093346062.1 recombinase RecB [Saccharopolyspora jiangxiensis] >emb 12049.6e-166
WP_093260192.1 recombinase RecB [Saccharopolyspora shandongensis] >emb 11981.0e-164
WP_029722113.1 recombinase RecB [Saccharopolyspora rectivirgula] >gb 11371.4e-155
WP_093417235.1 recombinase RecB [Saccharopolyspora flava] >emb 11008.3e-150
WP_030108350.1 recombinase RecB [Kutzneria albida] >gb 10571.6e-143
WP_092603872.1 recombinase RecB [Actinopolyspora xinjiangensis] >emb 10512.6e-142
WP_069848888.1 recombinase RecB [Actinoalloteichus hymeniacidonis] >gb 10503.1e-142

PSORT result

LocalizationCertaintyPSORT said
Not Clear