-- | --

IDSACE_2986 TypeCDS
From3272561 nt length1005
To3273565 aa length334
Gene pI4.59
Definitionxylose isomerase domain protein TIM barrel M.W (Da)37154
Note AseI frg.I
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_1824 putative sugar phosphate isomerases/epimerase4862.0e-138
coelSCO6571 hypothetical protein4749.0e-135
sgrSGR_1114 putative sugar phosphate isomerases/epimerases4745.0e-135
scabSCAB16731 putative sugar phosphate isomerases/epimerase4671.0e-132
saceSCAB16731 4671.0e-132

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

AP_endonuc_21Xylose isomerase-like TIM barrel22-274142.79.5e-42

AP_endonuc_2_N1AP endonuclease family 2 C terminus275-33075.51.7e-21

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_009951120.1 AP endonuclease [Saccharopolyspora erythraea] >emb 16690.0e+00
WP_037568585.1 AP endonuclease [Streptacidiphilus oryzae] 13520.0e+00
WP_005454662.1 sugar phosphate isomerase/epimerase [Saccharomonospora cyane... 13170.0e+00
WP_005447793.1 sugar phosphate isomerase/epimerase [Saccharomonospora azure... 13041.8e-179
WP_005462641.1 sugar phosphate isomerase/epimerase [Saccharomonospora glauc... 13014.0e-179
WP_005444390.1 sugar phosphate isomerase/epimerase [Saccharomonospora azure... 12981.1e-178
WP_030261766.1 AP endonuclease [Streptacidiphilus jeojiense] 12936.0e-178
WP_015785486.1 sugar phosphate isomerase/epimerase [Saccharomonospora virid... 12921.1e-177
WP_006237222.1 sugar phosphate isomerase/epimerase [Saccharomonospora xinji... 12911.6e-177
WP_042394487.1 sugar phosphate isomerase/epimerase [Streptacidiphilus carbo... 12901.8e-177

PSORT result

LocalizationCertaintyPSORT said
Not Clear