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IDSACE_3966 TypeCDS
From4350837 nt length948
To4349890 aa length315
Gene pI11.12
Definitionamino acid ABC transporter, permease protein M.W (Da)34258
Note AseI frg.C
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6546 putative polar amino acid ABC transporter ATP-binding protein3386.0e-94
coelSCO5259 atrB permease2363.0e-63
sgrSGR_5754 putative ABC transporter permease protein3219.0e-89
scabSCAB12501 putative polar amino acid ABC transporter permease protein2362.0e-63
saceSCAB12501 putative polar amino acid ABC transporter permease protein2362.0e-63
nfarnfa18900 putative ABC transporter permease2353.0e-63

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

BPD_transp_11Binding-protein-dependent transport system inner membrane component88-28070.31.5e-19

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_009944767.1 amino acid ABC transporter permease [Saccharopolyspora eryth... 12513.8e-172
WP_093146282.1 amino acid ABC transporter permease [Saccharopolyspora antim... 10431.3e-140
WP_093347661.1 amino acid ABC transporter permease [Saccharopolyspora jiang... 10412.4e-140
WP_093269803.1 amino acid ABC transporter permease [Saccharopolyspora shand... 10351.7e-139
KWX02136.1 Polar amino acid ABC transporter [Streptomyces thermoautotrophicu... 9748.2e-130
WP_079046014.1 amino acid ABC transporter permease [Streptomyces thermoauto... 9741.1e-129
WP_066891941.1 amino acid ABC transporter permease [Streptomyces thermoauto... 9711.1e-129
KWX03362.1 ABC transporter permease [Streptomyces thermoautotrophicus] >gb 9741.2e-129
WP_079131876.1 amino acid ABC transporter permease [Streptomyces nanshensis... 9324.1e-123
WP_030855988.1 amino acid ABC transporter permease [Streptomyces sp. NRRL S... 9297.7e-123

PSORT result

LocalizationCertaintyPSORT said
Not Clear