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IDSACE_4200 TypeCDS
From4670628 nt length945
To4671572 aa length314
GeneprsR pI4.75
Definitionregulator of sigma factor M.W (Da)33728
Note AseI frg.C
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_7158 putative regulator of sigma factor3253.0e-90
coelSCO0599 putative regulator of sig83284.0e-91
scabSCAB87131 putative anti-sigma factor3531.0e-98
saceSCAB87131 putative anti-sigma factor3531.0e-98
nfarnfa18850 hypothetical protein3301.0e-91

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

MEDS1MEDS: MEthanogen/methylotroph, DcmR Sensory domain16-159112.71.3e-32

HATPase_c_21Histidine kinase-like ATPase domain198-30959.92.1e-16

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_009946722.1 sensor histidine kinase [Saccharopolyspora erythraea] >emb 15430.0e+00
WP_091027140.1 sensor histidine kinase [Glycomyces harbinensis] >emb 9216.9e-122
WP_084429994.1 sensor histidine kinase [Kibdelosporangium aridum] >emb 9172.2e-121
WP_069159632.1 sensor histidine kinase [Nocardia altamirensis] 9069.5e-120
WP_013228266.1 sensor histidine kinase [Amycolatopsis mediterranei] >ref 9051.3e-119
WP_076987042.1 sensor histidine kinase [Actinosynnema sp. ALI-1.44] >gb 9031.8e-119
WP_076986251.1 sensor histidine kinase [Actinosynnema sp. ALI-1.44] >gb 8946.8e-118
WP_026922534.1 sensor histidine kinase [Glycomyces arizonensis] 8931.2e-117
WP_051046199.1 sensor histidine kinase [Nocardia asiatica] 8921.5e-117
WP_043778120.1 sensor histidine kinase [Amycolatopsis rifamycinica] >gb 8911.5e-117

PSORT result

LocalizationCertaintyPSORT said
Not Clear