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IDSACE_4330 TypeCDS
From4853693 nt length894
To4852800 aa length297
GenehopD pI7.39
Definitionputative squalene/phytoene synthase M.W (Da)32224
Note AseI frg.C
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_1653 squalene/phytoene synthase2832.0e-77
coelSCO6760 putative phytoene synthase2648.0e-72
sgrSGR_965 putative squalene/phytoene synthase2931.0e-80
scabSCAB12991 squalene/phytoene synthase2841.0e-77
saceSCAB12991 squalene/phytoene synthase2841.0e-77

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

SQS_PSY1Squalene/phytoene synthase28-282239.83.2e-71

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
CAM03599.1 putative squalene/phytoene synthase [Saccharopolyspora erythraea... 15330.0e+00
EQD82226.1 phytoene synthase [Saccharopolyspora erythraea D] 15280.0e+00
WP_009942891.1 squalene synthase HpnD [Saccharopolyspora erythraea] 14930.0e+00
SDZ09204.1 farnesyl-diphosphate farnesyltransferase [Saccharopolyspora shan... 10563.4e-143
WP_093274038.1 squalene synthase HpnD [Saccharopolyspora shandongensis] 10556.4e-143
WP_093422705.1 squalene synthase HpnD [Saccharopolyspora flava] >emb 10285.7e-139
SEF95973.1 farnesyl-diphosphate farnesyltransferase [Saccharopolyspora hirs... 10103.1e-136
SFM53349.1 phytoene synthase [Saccharopolyspora antimicrobica] 10103.2e-136
WP_093146095.1 squalene synthase HpnD [Saccharopolyspora antimicrobica] 10113.3e-136
WP_093353183.1 squalene synthase HpnD [Saccharopolyspora jiangxiensis] 10104.4e-136

PSORT result

LocalizationCertaintyPSORT said
Not Clear