-- | --

IDSACE_4415 TypeCDS
From4944770 nt length735
To4945504 aa length244
Gene pI10.24
DefinitionABC transporter, permease component M.W (Da)26340
Note AseI frg.E
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4854 putative ABC transporter permease protein1124.0e-26
sgrSGR_1014 putative sulfonate ABC transporter permease protein1294.0e-31
nfarnfa19550 putative ABC transporter membrane protein2884.0e-79

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

BPD_transp_11Binding-protein-dependent transport system inner membrane component70-22972.33.7e-20

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
CAM03684.1 ABC transporter, permease component [Saccharopolyspora erythraea... 11382.5e-157
EQD85052.1 ABC transporter permease [Saccharopolyspora erythraea D] 11325.2e-156
WP_081468229.1 ABC transporter permease [Saccharopolyspora erythraea] 11294.8e-155
WP_093419178.1 ABC transporter permease [Saccharopolyspora flava] >emb 8461.7e-112
KID31953.1 ABC-type nitrate/sulfonate/bicarbonate transport system, permease... 8375.1e-111
WP_084705753.1 hypothetical protein [Prauserella rugosa] 8353.3e-109
WP_030523371.1 ABC transporter permease [Nocardia rhamnosiphila] 8064.8e-106
WP_064114453.1 ABC transporter permease [Rhodococcus sp. EPR-134] 8008.6e-106
WP_057165898.1 ABC transporter permease [Mycobacterium sp. Root265] >gb 8049.6e-106
WP_083060918.1 ABC transporter permease [Mycobacterium bacteremicum] >gb 8021.5e-105

PSORT result

LocalizationCertaintyPSORT said
Not Clear