-- | --

IDSACE_5660 TypeCDS
From6357560 nt length1935
To6359494 aa length644
GenerbsC pI9.31
Definitionputative D-ribose ABC transporter permease protein M.W (Da)65618
Note AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5318 putative D-ribose ABC transporter substrate-binding protein/permease protein6470.0e+00
coelSCO2747 bifunctional carbohydrate binding and transport protein.5758.0e-165
sgrSGR_1095 putative D-ribose ABC transporter substrate-binding/permease protein6310.0e+00
scabSCAB58711 putative LacI-family transcriptional regulator, ribose operon repressor2514.0e-68
saceSCAB58711 putative LacI-family transcriptional regulator, ribose operon repressor2514.0e-68

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Peripla_BP_41Periplasmic binding protein domain366-614209.75e-62

BPD_transp_21Branched-chain amino acid transport system / permease component46-310166.65.6e-49

Peripla_BP_11Periplasmic binding proteins and sugar binding domain of LacI family370-57689.03.1e-25

Peripla_BP_31Periplasmic binding protein-like domain489-63769.14.9e-19

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_009948260.1 transporter [Saccharopolyspora erythraea] >emb 26450.0e+00
WP_093148356.1 transporter [Saccharopolyspora antimicrobica] >emb 22870.0e+00
WP_093345299.1 transporter [Saccharopolyspora jiangxiensis] >emb 22770.0e+00
WP_078759500.1 transporter [Marinactinospora thermotolerans] >emb 19460.0e+00
WP_013415799.1 transporter [Rhodococcus hoagii] >emb 19220.0e+00
WP_087587728.1 transporter [Rhodococcus hoagii] 19170.0e+00
OQQ21102.1 transporter [Rhodococcus hoagii] 19160.0e+00
WP_087587869.1 transporter [Rhodococcus hoagii] 19150.0e+00
ORL36551.1 transporter [Rhodococcus hoagii] >gb 19150.0e+00
WP_087587645.1 transporter [Rhodococcus hoagii] 19130.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear