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IDSACE_5919 TypeCDS
From6646243 nt length1611
To6644633 aa length536
Gene pI5.42
Definitionhypothetical protein M.W (Da)55705
Note AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2548 putative tRNA pseudouridine synthase2934.0e-80
coelSCO5709 probable tRNA pseudouridine synthase2696.0e-73
sgrSGR_1808 putative tRNA pseudouridine synthase2866.0e-78
scabSCAB25321 putative tRNA pseudouridine synthase3015.0e-83
saceSCAB25321 putative tRNA pseudouridine synthase3015.0e-83
nfarnfa40530 putative tRNA pseudouridine synthase2887.0e-79

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

TruB_N1TruB family pseudouridylate synthase (N terminal domain)18-170171.81.1e-50

TruB_C1tRNA Pseudouridine synthase II, C terminal227-28063.69.4e-18

TruB_C_21tRNA pseudouridylate synthase B C-terminal domain171-21143.32.7e-11

DUF42321Protein of unknown function (DUF4232)394-51435.49.1e-09

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
CAM05102.1 hypothetical protein SACE_5919 [Saccharopolyspora erythraea NRRL... 20710.0e+00
EQD88274.1 tRNA pseudouridine synthase B [Saccharopolyspora erythraea D] 9911.0e-129
WP_081468403.1 tRNA pseudouridine(55) synthase TruB [Saccharopolyspora eryt... 9833.7e-128
WP_009950442.1 DUF4232 domain-containing protein [Saccharopolyspora erythra... 9333.3e-122
WP_093261683.1 tRNA pseudouridine(55) synthase TruB [Saccharopolyspora shan... 8749.7e-112
WP_083821575.1 tRNA pseudouridine(55) synthase TruB [Saccharopolyspora spin... 8771.1e-111
WP_093344788.1 tRNA pseudouridine(55) synthase TruB [Saccharopolyspora jian... 8642.6e-110
WP_093413252.1 tRNA pseudouridine(55) synthase TruB [Saccharopolyspora flav... 8625.2e-110
WP_093146532.1 tRNA pseudouridine(55) synthase TruB [Saccharopolyspora anti... 8564.9e-109
WP_029719305.1 tRNA pseudouridine(55) synthase TruB [Saccharopolyspora rect... 8122.2e-102

PSORT result

LocalizationCertaintyPSORT said
Not Clear