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IDSACE_5927 TypeCDS
From6655703 nt length1059
To6654645 aa length352
GenenusA pI5.91
Definitionputative transcriptional termination/antitermination factor M.W (Da)37380
Note AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2553 putative transcriptional termination/antitermination factor4254.0e-120
coelSCO5704 putative transcriptional termination/antitermination factor3872.0e-108
sgrSGR_1813 putative transcriptional termination/antitermination factor4031.0e-113
scabSCAB25371 putative transcriptional termination/antitermination factor4161.0e-117
saceSCAB25371 putative transcriptional termination/antitermination factor4161.0e-117
nfarnfa40680 putative transcriptional termination/antitermination factor4892.0e-139

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

KH_51NusA-like KH domain210-27888.81.6e-25

NusA_N2NusA N-terminal domain6-60, 66-10070.81.1e-19

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_009943772.1 transcription termination/antitermination protein NusA [Sacc... 17450.0e+00
WP_010306297.1 transcription termination/antitermination protein NusA [Sacc... 16530.0e+00
WP_093263008.1 transcription termination/antitermination protein NusA [Sacc... 16370.0e+00
WP_029719312.1 transcription termination/antitermination protein NusA [Sacc... 16340.0e+00
WP_093413263.1 transcription termination/antitermination protein NusA [Sacc... 16280.0e+00
WP_093344769.1 transcription termination/antitermination protein NusA [Sacc... 16200.0e+00
WP_093146540.1 transcription termination/antitermination protein NusA [Sacc... 16170.0e+00
WP_019854789.1 transcription termination/antitermination protein NusA [Acti... 15690.0e+00
WP_092627292.1 transcription termination/antitermination protein NusA [Acti... 15580.0e+00
WP_092522355.1 transcription termination/antitermination protein NusA [Acti... 15550.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear