ID	SACE_6040	Type	CDS
From	6777779	nt length	936
To	6776844	aa length	311
Gene	whiG	pI	5.33
Definition	putative RNA polymerase sigma factor	M.W (Da)	34718
Note		AseI frg.	A
SignalP v.4.0	Non-secretory protein | plot	Category

Orthologs (if any)

Pfam search result

	Model	No.	Description	Position (aa)	Score	E-value
	Sigma70_r2	1	Sigma-70 region 2	85-157	66.7	1e-18
	Sigma70_r4	1	Sigma-70, region 4	257-304	60.7	6.2e-17
	Sigma70_r4_2	1	Sigma-70, region 4	250-303	40.7	1.2e-10
	Sigma70_r3	1	Sigma-70 region 3	166-241	39.2	5e-10

BLAST search result (top 10 hits)

ID	Description	Score	E-value
WP_009943630.1	FliA/WhiG family RNA polymerase sigma factor [Saccharopolysp...	1353	0.0e+00
CAM05214.1	putative RNA polymerase sigma factor [Saccharopolyspora erythrae...	1352	0.0e+00
WP_093262783.1	RNA polymerase sigma factor WhiG [Saccharopolyspora shandong...	1160	2.9e-158
WP_010305995.1	FliA/WhiG family RNA polymerase sigma factor [Saccharopolysp...	1152	8.5e-157
WP_093147552.1	RNA polymerase sigma factor WhiG [Saccharopolyspora antimicr...	1144	9.3e-157
SFM70892.1	RNA polymerase sigma factor for flagellar operon FliA [Saccharop...	1144	6.6e-156
WP_093413366.1	RNA polymerase sigma factor WhiG [Saccharopolyspora flava] >...	1131	5.9e-154
WP_093344549.1	RNA polymerase sigma factor WhiG [Saccharopolyspora jiangxie...	1130	9.1e-154
WP_043572202.1	FliA/WhiG family RNA polymerase sigma factor [Actinopolyspor...	1131	1.0e-153
WP_092522972.1	RNA polymerase sigma factor WhiG [Actinopolyspora saharensis...	1129	1.7e-153

PSORT result

Localization	Certainty	PSORT said
Not Clear

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