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IDSACE_6057 TypeCDS
From6793495 nt length1557
To6791939 aa length518
Geneffh pI9.8
Definitionsignal recognition particle GTPase M.W (Da)55001
Note AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2648 putative signal recognition particle, subunit SRP546620.0e+00
coelSCO5586 signal recognition particle protein6085.0e-175
sgrSGR_1892 putative signal recognition particle6650.0e+00
scabSCAB26231 putative signal recognition particle, subunit SRP546560.0e+00
saceSCAB26231 putative signal recognition particle, subunit SRP546560.0e+00
nfarnfa41600 putative signal recognition particle protein6690.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

SRP541SRP54-type protein, GTPase domain100-298234.66.5e-70

SRP_SPB1Signal peptide binding domain330-427102.41.5e-29

SRP54_N1SRP54-type protein, helical bundle domain5-8273.69.9e-21

cobW1CobW/HypB/UreG, nucleotide-binding domain102-25324.71.3e-05

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_009943610.1 signal recognition particle protein [Saccharopolyspora eryth... 21160.0e+00
WP_093262762.1 signal recognition particle protein [Saccharopolyspora shand... 19850.0e+00
WP_010305936.1 signal recognition particle protein [Saccharopolyspora spino... 19630.0e+00
WP_093146643.1 signal recognition particle protein [Saccharopolyspora antim... 19610.0e+00
WP_093344520.1 signal recognition particle protein [Saccharopolyspora jiang... 19590.0e+00
WP_093413389.1 signal recognition particle protein [Saccharopolyspora flava... 19520.0e+00
WP_029722345.1 signal recognition particle protein [Saccharopolyspora recti... 19430.0e+00
WP_017974020.1 signal recognition particle protein [Actinopolyspora halophi... 19430.0e+00
WP_092522997.1 signal recognition particle protein [Actinopolyspora saharen... 19420.0e+00
WP_043572222.1 signal recognition particle protein [Actinopolyspora erythra... 19360.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear