ID	SACE_6711	Type	CDS
From	7517229	nt length	477
To	7516753	aa length	158
Gene	sigD	pI	9.26
Definition	RNA polymerase sigma factor	M.W (Da)	17128
Note		AseI frg.	F
SignalP v.4.0	Non-secretory protein | plot	Category

Orthologs (if any)

Pfam search result

	Model	No.	Description	Position (aa)	Score	E-value
	Sigma70_r2	1	Sigma-70 region 2	1-66	45.3	4.9e-12
	Sigma70_r4_2	1	Sigma-70, region 4	98-148	44.9	6.2e-12
	Sigma70_r4	1	Sigma-70, region 4	101-150	40.4	1.4e-10

BLAST search result (top 10 hits)

ID	Description	Score	E-value
CAM05877.1	RNA polymerase sigma factor [Saccharopolyspora erythraea NRRL 23...	800	1.3e-108
WP_021341376.1	RNA polymerase sigma factor SigD [Saccharopolyspora erythrae...	797	1.1e-107
WP_093155087.1	MULTISPECIES: RNA polymerase subunit sigma [Saccharopolyspor...	788	2.8e-106
WP_010316099.1	RNA polymerase sigma factor SigD [Saccharopolyspora spinosa]	786	4.8e-106
WP_093414059.1	RNA polymerase subunit sigma [Saccharopolyspora flava] >emb	785	8.1e-106
WP_093265524.1	RNA polymerase subunit sigma [Saccharopolyspora shandongensi...	785	9.0e-106
WP_017976715.1	MULTISPECIES: RNA polymerase sigma factor SigD [Actinopolysp...	782	2.3e-105
WP_019852908.1	RNA polymerase sigma factor SigD [Actinopolyspora mortivalli...	778	9.0e-105
WP_029719648.1	RNA polymerase sigma factor SigD [Saccharopolyspora rectivir...	770	1.4e-103
WP_043570589.1	MULTISPECIES: RNA polymerase sigma factor SigD [Actinopolysp...	767	4.6e-103

PSORT result

Localization	Certainty	PSORT said
Not Clear

---