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IDSACE_6733 TypeCDS
From7544762 nt length366
To7545127 aa length121
Gene pI5.2
DefinitionDNA-binding protein M.W (Da)12954
Note AseI frg.F
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2021 putative DNA-binding protein1167.0e-28
coelSCO6208 hypothetical protein1004.0e-23
sgrSGR_1312 conserved hypothetical protein1191.0e-28
scabSCAB18551 putative DNA-binding protein1166.0e-28
saceSCAB18551 putative DNA-binding protein1166.0e-28

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_221HTH domain53-11476.79.8e-22

HTH_231Homeodomain-like domain74-11529.34.7e-07

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_009943332.1 transcriptional regulator [Saccharopolyspora erythraea] >emb... 6072.4e-80
WP_093265551.1 transcriptional regulator [Saccharopolyspora shandongensis] 5171.1e-66
WP_010316140.1 transcriptional regulator [Saccharopolyspora spinosa] 5143.6e-66
SDX45059.1 HTH domain-containing protein [Saccharopolyspora shandongensis] 5146.0e-66
WP_093414084.1 transcriptional regulator [Saccharopolyspora flava] >emb 5101.6e-65
WP_093352393.1 transcriptional regulator [Saccharopolyspora jiangxiensis] 5074.5e-65
WP_017976734.1 transcriptional regulator [Actinopolyspora halophila] 5057.6e-65
WP_093155107.1 transcriptional regulator [Saccharopolyspora antimicrobica] ... 5013.0e-64
SEG95274.1 HTH domain-containing protein [Saccharopolyspora hirsuta] >emb 5023.2e-64
WP_092597541.1 transcriptional regulator [Actinopolyspora xinjiangensis] >e... 4997.2e-64

PSORT result

LocalizationCertaintyPSORT said
Not Clear