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IDSACE_6854 TypeCDS
From7666839 nt length3495
To7663345 aa length1164
Gene pI4.63
DefinitionDNA-directed RNA polymerase, beta subunit M.W (Da)128683
Note AseI frg.F
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4914 RNA polymerase beta subunit18380.0e+00
coelSCO4654 DNA-directed RNA polymerase beta chain17710.0e+00
sgrSGR_2869 putative RNA polymerase beta subunit18370.0e+00
scabSCAB37191 RNA polymerase beta subunit18460.0e+00
saceSCAB37191 RNA polymerase beta subunit18460.0e+00
nfarnfa50990 putative RNA polymerase beta subunit19680.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

RNA_pol_Rpb2_61RNA polymerase Rpb2, domain 6632-1047529.25.7e-159

RNA_pol_Rpb2_31RNA polymerase Rpb2, domain 3426-494101.61.8e-29

RNA_pol_Rpb2_21RNA polymerase Rpb2, domain 2168-343101.73.4e-29

RNA_pol_Rpb2_71RNA polymerase Rpb2, domain 71049-112394.53.4e-27

RNA_pol_Rpb2_451RNA polymerase beta subunit external 1 domain504-57092.21.6e-26

RNA_pol_Rpb2_11RNA polymerase beta subunit82-41180.11.3e-22

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011875176.1 DNA-directed RNA polymerase subunit beta [Saccharopolyspora ... 60920.0e+00
WP_093352188.1 DNA-directed RNA polymerase subunit beta [Saccharopolyspora ... 58050.0e+00
WP_093155263.1 DNA-directed RNA polymerase subunit beta [Saccharopolyspora ... 58020.0e+00
WP_093265680.1 DNA-directed RNA polymerase subunit beta [Saccharopolyspora ... 57950.0e+00
WP_010315476.1 DNA-directed RNA polymerase subunit beta [Saccharopolyspora ... 57820.0e+00
WP_029719111.1 DNA-directed RNA polymerase subunit beta [Saccharopolyspora ... 57470.0e+00
WP_093414217.1 DNA-directed RNA polymerase subunit beta [Saccharopolyspora ... 57130.0e+00
WP_092597366.1 DNA-directed RNA polymerase subunit beta [Actinopolyspora xi... 56540.0e+00
WP_043570370.1 DNA-directed RNA polymerase subunit beta [Actinopolyspora er... 56510.0e+00
WP_092925868.1 DNA-directed RNA polymerase subunit beta [Actinopolyspora al... 56390.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear