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IDSACE_6975 TypeCDS
From7795303 nt length1176
To7794128 aa length391
Gene pI7.72
DefinitionErfK/YbiS/YcfS/YnhG M.W (Da)41796
Note AseI frg.F
SignalP v.4.0Signal peptide | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_3322 putative lipoprotein1965.0e-51
coelSCO5458 putative lipoprotein1963.0e-51
scabSCAB53001 putative lipoprotein2189.0e-58
saceSCAB53001 2189.0e-58
nfarnfa51960 hypothetical protein3417.0e-95

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

YkuD1L,D-transpeptidase catalytic domain243-36262.64.8e-17

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
CAM06137.1 ErfK/YbiS/YcfS/YnhG [Saccharopolyspora erythraea NRRL 2338] >gb 18940.0e+00
WP_044548092.1 transpeptidase [Saccharopolyspora erythraea] 18420.0e+00
WP_093269416.1 L,D-transpeptidase [Saccharopolyspora shandongensis] >emb 13850.0e+00
WP_010312331.1 transpeptidase [Saccharopolyspora spinosa] 13740.0e+00
WP_093354102.1 L,D-transpeptidase [Saccharopolyspora jiangxiensis] >emb 13720.0e+00
SFM38690.1 Lipoprotein-anchoring transpeptidase ErfK/SrfK [Saccharopolyspor... 13710.0e+00
WP_093147132.1 L,D-transpeptidase [Saccharopolyspora antimicrobica] 13680.0e+00
WP_093414372.1 L,D-transpeptidase [Saccharopolyspora flava] >emb 13610.0e+00
WP_017976947.1 hypothetical protein [Actinopolyspora halophila] 12283.6e-166
WP_019852660.1 hypothetical protein [Actinopolyspora mortivallis] 12171.9e-164

PSORT result

LocalizationCertaintyPSORT said
Not Clear